import sys import os import time import timeit import json import resource import locale import settings """ Command-line utility for loading cave data files into troggle's database. The command line options select which combination of classes of data will be imported, e.g. cave data, logbook data, cavers (people) data. The set of imports requested are put into a job queue in a valid order, toegether with any necessary initialisation if it is a complete reset, and the queue is then executed. In future all these functions may be moved to a control panel webpage running within the troggle application. """ print(" - settings on loading databaseReset.py", flush=True) os.environ['PYTHONPATH'] = settings.PYTHON_PATH os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'settings') print(" - settings on loading databaseReset.py") import django print(f" - Memory footprint before loading Django: {resource.getrusage(resource.RUSAGE_SELF)[2] / 1024.0:.3f} MB") try: django.setup() except: print(" ! Cyclic reference failure. Can occur when the initial db is empty. Fixed now (in UploadFileForm) but easy to reintroduce..") raise print(f" - Memory footprint after loading Django: {resource.getrusage(resource.RUSAGE_SELF)[2] / 1024.0:.3f} MB") from troggle.core.models.troggle import DataIssue import troggle.core.models.survex from django.core import management from django.db import connection, close_old_connections, connections from django.http import HttpResponse from django.urls import reverse from django.contrib.auth.models import User from django.db import transaction from troggle.core.utils import get_process_memory from troggle.core.models.caves import Cave, Entrance from troggle.parsers.imports import import_caves, import_people, import_surveyscans, \ import_logbooks, import_logbook, import_QMs, import_survex, import_loadpos, import_drawingsfiles if os.geteuid() == 0: # This protects the server from having the wrong file permissions written on logs and caches print("This script should be run as expo not root - quitting") exit() expouser=settings.EXPOUSER expouserpass=settings.EXPOUSERPASS expouseremail=settings.EXPOUSER_EMAIL expoadminuser=settings.EXPOADMINUSER expoadminuserpass=settings.EXPOADMINUSERPASS expoadminuseremail=settings.EXPOADMINUSER_EMAIL def reinit_db(): """Rebuild database from scratch. Deletes the file first if sqlite is used, otherwise it drops the database and creates it. Note - initial loading of troggle.sqlite will already have populated the models in memory (django python models, not the database), so there is already a full load of stuff known. Deleting the db file does not clear memory. """ print("Reinitialising db ",end="") print(django.db.connections.databases['default']['NAME']) currentdbname = settings.DATABASES['default']['NAME'] if currentdbname == ':memory:': # closing connections should wipe the in-memory database django.db.close_old_connections() for conn in django.db.connections.all(): print(" ! Closing another connection to db...") conn.close() elif django.db.connections.databases['default']['ENGINE'] == 'django.db.backends.sqlite3': if os.path.isfile(currentdbname): try: print(" - deleting " + currentdbname) os.remove(currentdbname) except OSError: print(" ! OSError on removing: " + currentdbname + "\n ! Is the file open in another app? Is the server running?\n") raise else: print(" - No database file found: " + currentdbname + " ..continuing, will create it.\n") else: print(f" - Attempting to nuke : {currentdbname}\n") # this is now completely failing to nuke MariaDB adequately, and it crashes when creating Area objects with a no null parent message # when null parents are explciitly allowed in the model. cursor = django.db.connection.cursor() cursor.execute(f"DROP DATABASE {currentdbname}") cursor.execute(f"CREATE DATABASE {currentdbname}") cursor.execute(f"ALTER DATABASE {currentdbname} CHARACTER SET=utf8") cursor.execute(f"USE {currentdbname}") print(f" - Nuked : {currentdbname}\n") print(" - Migrating: " + django.db.connections.databases['default']['NAME']) if django.db.connections.databases['default']['ENGINE'] == 'django.db.backends.sqlite3': #with transaction.atomic(): management.call_command('makemigrations','core', interactive=False) management.call_command('migrate', interactive=False) management.call_command('migrate','core', interactive=False) else: management.call_command('makemigrations','core', interactive=False) management.call_command('migrate', interactive=False) management.call_command('migrate','core', interactive=False) print(" - done migration on: " + settings.DATABASES['default']['NAME']) print("users in db already: ",len(User.objects.all())) with transaction.atomic(): try: print(" - Setting up expo user on: " + django.db.connections.databases['default']['NAME']) print(f" - user: {expouser} ({expouserpass:.5}...) <{expouseremail}> ") user = User.objects.create_user(expouser, expouseremail, expouserpass) user.is_staff = False user.is_superuser = False user.save() except: print(" ! INTEGRITY ERROR user on: " + settings.DATABASES['default']['NAME']) print(django.db.connections.databases['default']['NAME']) print(" ! You probably have not got a clean db when you thought you had.\n") print(" ! Also you are probably NOT running an in-memory db now.\n") print("users in db: ",len(User.objects.all())) print("tables in db: ",len(connection.introspection.table_names())) memdumpsql(fn='integrityfail.sql') django.db.connections.databases['default']['NAME'] = ':memory:' #raise with transaction.atomic(): try: print(" - Setting up expoadmin user on: " + django.db.connections.databases['default']['NAME']) print(f" - user: {expoadminuser} ({expoadminuserpass:.5}...) <{expoadminuseremail}> ") user = User.objects.create_user(expoadminuser, expoadminuseremail, expoadminuserpass) user.is_staff = True user.is_superuser = True user.save() except: print(" ! INTEGRITY ERROR user on: " + settings.DATABASES['default']['NAME']) print(django.db.connections.databases['default']['NAME']) print(" ! You probably have not got a clean db when you thought you had.\n") print(" ! Also you are probably NOT running an in-memory db now.\n") print("users in db: ",len(User.objects.all())) print("tables in db: ",len(connection.introspection.table_names())) memdumpsql(fn='integrityfail.sql') django.db.connections.databases['default']['NAME'] = ':memory:' #raise def memdumpsql(fn): djconn = django.db.connection from dump import _iterdump with open(fn, 'w') as f: for line in _iterdump(djconn): f.write(f"{line.encode('utf8')}\n") return True # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - class JobQueue(): """A list of import operations to run. Always reports profile times of the import operations in the same order. """ def __init__(self,run): self.runlabel = run self.queue = [] # tuples of (jobname, jobfunction) self.results = {} self.results_order=[ "date","runlabel","reinit", "caves", "people", "logbooks", "QMs", "scans", "survex", "drawings", "test" ] for k in self.results_order: self.results[k]=[] self.tfile = "import_profile.json" self.htmlfile = "profile.html" # for HTML results table. Not yet done. #Adding elements to queue - enqueue def enq(self,label,func): self.queue.append((label,func)) return True def loadprofiles(self): """Load timings for previous imports for each data import type """ if os.path.isfile(self.tfile): try: f = open(self.tfile, "r") data = json.load(f) for j in data: self.results[j] = data[j] except: print(f"FAILURE parsing JSON file {self.tfile}") # Python bug: https://github.com/ShinNoNoir/twitterwebsearch/issues/12 f.close() for j in self.results_order: self.results[j].append(None) # append a placeholder return True def dellastprofile(self): """trim one set of data from the results """ for j in self.results_order: self.results[j].pop() # delete last item return True def delfirstprofile(self): """trim one set of data from the results """ for j in self.results_order: self.results[j].pop(0) # delete zeroth item return True def saveprofiles(self): """Save timings for the set of imports just completed """ with open(self.tfile, 'w') as f: json.dump(self.results, f) return True def runqonce(self): """Run all the jobs in the queue provided - once """ print("** Running job ", self.runlabel,end=" to ") print(django.db.connections.databases['default']['NAME']) jobstart = time.time() print(f"-- Initial memory in use {get_process_memory():.3f} MB") self.results["date"].pop() self.results["date"].append(jobstart) self.results["runlabel"].pop() self.results["runlabel"].append(self.runlabel) for runfunction in self.queue: start = time.time() memstart = get_process_memory() #-------------------- runfunction[1]() # invokes function passed in the second item in the tuple #-------------------- memend = get_process_memory() duration = time.time()-start #print(" - MEMORY start:{:.3f} MB end:{:.3f} MB change={:.3f} MB".format(memstart,memend, )) print("\n*- Ended \"", runfunction[0], f"\" {duration:.1f} seconds + {memend - memstart:.3f} MB ({memend:.3f} MB)") self.results[runfunction[0]].pop() # the null item self.results[runfunction[0]].append(duration) jobend = time.time() jobduration = jobend-jobstart print(f"** Ended job {self.runlabel} - {jobduration:.1f} seconds total.") return True def append_placeholders(self): for j in self.results_order: self.results[j].append(None) # append a placeholder def run_now_django_tests(self,n): """Runs the standard django test harness system which is in troggle/core/TESTS/tests.py """ management.call_command('test', verbosity=n) django.db.close_old_connections() def run(self): """Initialises profile timings record, initiates relational database, runs the job queue saving the imported data as an SQL image and saves the timing profile data. """ self.loadprofiles() print("-- start ", django.db.connections.databases['default']['ENGINE'], django.db.connections.databases['default']['NAME']) self.runqonce() if settings.DATABASES['default']['NAME'] ==":memory:": memdumpsql('memdump.sql') # saved contents of in-memory db, could be imported later.. self.saveprofiles() return True def showprofile(self): """Prints out the time it took to run the jobqueue """ for k in self.results_order: if k =="test": break elif k =="date": print(" days ago ", end=' ') else: print('%10s (s)' % k, end=' ') percen=0 r = self.results[k] for i in range(len(r)): if k == "runlabel": if r[i]: rp = r[i] else: rp = " - " print('%8s' % rp, end=' ') elif k =="date": # Calculate dates as days before present if r[i]: if i == len(r)-1: print(" this", end=' ') else: # prints one place to the left of where you expect if r[len(r)-1]: s = r[i]-r[len(r)-1] elif r[len(r)-2]: s = r[i]-r[len(r)-2] else: s = 0 days = (s)/(24*60*60) print(f'{days:8.2f}', end=' ') elif r[i]: print(f'{r[i]:8.1f}', end=' ') if i == len(r)-1 and r[i-1]: percen = 100* (r[i] - r[i-1])/r[i-1] if abs(percen) >0.1: print(f'{percen:8.1f}%', end=' ') else: print(" - ", end=' ') print("") print("\n") return True def usage(): print("""Usage is 'python databaseReset.py [runlabel]' where command is: test - testing... imports people and prints profile. Deletes nothing. profile - print the profile from previous runs. Import nothing. - del - deletes last entry - delfirst - deletes first entry reset - normal usage: clear database and reread everything from files init - initialisation. Automatic if you run reset. caves - read in the caves (must run first after initialisation) people - read in the people from folk.csv (must run after 'caves') logbooks - read in the logbooks QMs - read in the QM csv files (older caves only) scans - the survey scans in all the wallets (must run before survex) drawings - read in the Tunnel & Therion files - which scans the survey scans too survex - read in the survex files - all the survex blocks and entrances x/y/z dumplogbooks - Not used. write out autologbooks (not working? use http://localhost:8000/controlpanel ) logbook - read a single logbook. Defautl set in python code and [runlabel] is an optional string identifying this run of the script in the stored profiling data 'import-profile.json' caves and logbooks must be run on an empty db before the others as they set up db tables used by the others. Note that running the subfunctions will not produce a consistent website - only the full 'reset' does that. """) if __name__ == "__main__": if os.geteuid() == 0: print("Do not run as root or using sudo - file permissions for cache files and logs will break") print("Aborting run.") exit() if sys.getfilesystemencoding() != "utf-8": print("UTF-8 is NOT the default file encoding. You must fix this.") print(f'- {sys.getdefaultencoding()=}') print(f'- {sys.getfilesystemencoding()=}') print(f'- {locale.getdefaultlocale()=}') print(f'- {locale.getpreferredencoding()=}') print("Aborting run.") exit() if len(sys.argv)>2: runlabel = sys.argv[len(sys.argv)-1] else: runlabel=None jq = JobQueue(runlabel) if len(sys.argv)==1: usage() exit() elif "init" in sys.argv: jq.enq("reinit",reinit_db) elif "test" in sys.argv: jq.enq("caves",import_caves) jq.enq("people",import_people) elif "test2" in sys.argv: jq.enq("QMs",import_QMs) jq.enq("drawings",import_drawingsfiles) jq.enq("survex",import_survex) elif "caves" in sys.argv: jq.enq("caves",import_caves) elif "logbooks" in sys.argv: jq.enq("logbooks",import_logbooks) elif "logbook" in sys.argv: jq.enq("logbooks",import_logbook) # default year set in imports.py elif "people" in sys.argv: jq.enq("people",import_people) elif "QMs" in sys.argv: jq.enq("QMs",import_QMs) elif "reset" in sys.argv: jq.enq("reinit",reinit_db) jq.enq("caves",import_caves) jq.enq("people",import_people) jq.enq("scans",import_surveyscans) jq.enq("logbooks",import_logbooks) jq.enq("QMs",import_QMs) jq.enq("drawings",import_drawingsfiles) jq.enq("survex",import_survex) elif "scans" in sys.argv: jq.enq("scans",import_surveyscans) elif "survex" in sys.argv: jq.enq("survex",import_survex) elif "loadpos" in sys.argv: jq.enq("survex",import_loadpos) elif "drawings" in sys.argv: jq.enq("drawings",import_drawingsfiles) elif "dumplogbooks" in sys.argv: # untested in 2020 dumplogbooks() # elif "writecaves" in sys.argv: # untested in 2020 - will overwrite input files!! # writeCaves() elif "profile" in sys.argv: if runlabel == 'del' : jq.loadprofiles() jq.dellastprofile() jq.dellastprofile() # twice because loadprofiles adds a dummy jq.showprofile() jq.saveprofiles() if runlabel == 'delfirst' : jq.loadprofiles() jq.dellastprofile() # remove the dummy jq.delfirstprofile() jq.showprofile() jq.saveprofiles() else: jq.loadprofiles() jq.showprofile() exit() elif "help" in sys.argv: usage() exit() else: usage() print(f"{sys.argv[1]} not recognised as a command.") exit() jq.run() jq.showprofile()